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Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA binding
2
Transcription
Assay
4
ChIP-seq
2
single cell RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
6
Homo sapiens
Target of assay
4
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
Biosample type
6
primary cell
Organ
4
pancreas
Life stage
6
adult
Available data
6
fastq
4
bam
4
bigWig
2
csv
1
bed narrowPeak
Platform
4
Illumina HiSeq 2000
2
Illumina HiSeq 2500
Run type
4
single-ended
2
paired-ended
Read length (nt)
264
36
252
101
235
100
206
50
204
76
91
51
61
8
59
75
51
40
33
90
27
43
23
98
22
49
20
16
20
28
15
26
14
27
14
102
11
25
10
35
10
91
8
41
7
24
7
33
6
200
5
32
5
151
4
44
4
61
4
94
3
67
2
37
2
38
2
70
2
74
2
97
2
150
1
20
1
30
1
69
1
72
1
99
1
105
1
110
1
125
1
140
1
147
Library made from
4
DNA
2
RNA
Date released
3
August, 2017
2
September, 2018
1
November, 2018
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
anisogenic
Audit category:
4
missing controlled_by
Showing 6 of 6 results
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Experiment
TSTSR248LEQ
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell female adult (48 years)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR728QVV
released
single cell RNA-seq
of pancreatic cell
Homo sapiens
pancreatic cell female adult (59 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR461MDN
released
single cell RNA-seq
of pancreatic cell
Homo sapiens
pancreatic cell female adult (51 year) and male adult (17 years) and male adult (38 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR690557
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR179007
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR846115
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP