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Assay category
2
DNA accessibility
1
DNA binding
Assay
2
FAIRE-seq
1
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Biosample type
2
tissue
1
cell line
Organ
2
pancreas
1
liver
Life stage
1
adult
1
child
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
1
bed broadPeak
1
bigBed broadPeak
Platform
346
Illumina HiSeq 2000
174
Illumina HiSeq 2500
141
Illumina Genome Analyzer IIx
106
Illumina Genome Analyzer
76
Illumina NovaSeq 6000
25
Illumina Genome Analyzer II
21
Illumina NextSeq 500
16
Illumina Genome Analyzer IIe
16
Illumina HiSeq 4000
8
HiSeq 1500
3
Illumina Genome Analyzer I
2
Applied Biosystems SOLiD System 3 Plus
Run type
3
single-ended
Read length (nt)
1
35
1
36
1
50
Library made from
3
DNA
Date released
1
August, 2017
1
November, 2017
1
November, 2018
Lab
3
AMP-T2D consortium
Replication type
1
anisogenic
1
isogenic
1
unreplicated
files.run_type!
paired-ended
Showing 3 of 3 results
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Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR580557
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP