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Citing CMDGA
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Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
5
Homo sapiens
Target of assay
4
control
1
histone
1
histone modification
1
narrow histone mark
Biosample type
5
in vitro differentiated cells
Organ
5
embryo
Life stage
3
embryonic
2
unknown
Available data
14
bam
14
fastq
9
bed narrowPeak
bigWig
2
bed bed3+
Platform
3
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2500
Run type
5
single-ended
Read length (nt)
5
36
1
50
Library made from
5
DNA
Date released
3
February, 2018
2
December, 2017
Lab
5
AMP-T2D consortium
Replication type
4
unreplicated
1
isogenic
Audit category:
1
missing controlled_by
lab.title!
Karen Mohlke, UNC
files.file_type!
bigWig
files.read_length!
50
Showing 5 of 5 results
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Experiment
TSTSR198993
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR903937
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR207909
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR020690
released
Audit not_compliant
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR537658
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP