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Citing CMDGA
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Assay category
1
DNA accessibility
1
DNA methylation
Assay
378
ChIP-seq
14
total RNA-seq
2
Hi-C
2
STARR-seq
2
pCHi-C
1
ATAC-seq
1
WGBS
1
whole genome sequencing assay
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Organ
2
liver
Life stage
1
adult
1
child
Available data
2
bam
1
bed bed3
1
bed bedMethyl
1
bed narrowPeak
1
bigBed bedMethyl
1
bigWig
1
fastq
Platform
1
Illumina HiSeq X Ten
Run type
1
paired-ended
Read length (nt)
1
151
Library made from
2
DNA
Date released
1
February, 2021
1
November, 2018
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
Audit category:
1
inconsistent replicate
lab.title!
Karen Mohlke, UNC
organ_slims!
esophagus
Showing 2 of 2 results
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Experiment
DSR057RCG
released
Audit error
1
ATAC-seq
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR496DZA
released
WGBS
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP