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Assay category
8
DNA accessibility
Assay
964
ChIP-seq
404
total RNA-seq
222
ATAC-seq
104
single cell RNA-seq
34
DNase-seq
32
pCHi-C
15
Hi-C
10
RRBS
8
snATAC-seq
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
FAIRE-seq
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
8
T1D
RFA
8
T1D
Experiment status
8
released
Organism
8
Homo sapiens
Biosample type
tissue
8
primary cell
Organ
8
blood
8
bodily fluid
Life stage
6
adult
2
unknown
Library made from
8
DNA
Date released
8
January, 2021
Lab
Klaus Kaestner, Upenn
8
Kyle Gaulton, UCSD
Replication type
6
unreplicated
2
anisogenic
lab.title!
Klaus Kaestner, Upenn
biosample_type!
tissue
Showing 8 of 8 results
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Experiment
DSR294OVU
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR247GCT
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR644USU
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell female adult (54 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR043PPI
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male adult (48 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR343BJL
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male adult (45 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR816KMT
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male adult (53 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR518CVA
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male adult (46 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR692GIQ
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male adult (47 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D