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Citing CMDGA
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Assay category
3
Transcription
2
DNA binding
Assay
3
total RNA-seq
2
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
11
hg19
5
GRCh38
Organism
5
Homo sapiens
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Biosample type
4
in vitro differentiated cells
1
primary cell
Life stage
5
embryonic
Available data
5
bam
5
bigWig
4
fastq
3
tsv
2
bed narrowPeak
Platform
3
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2000
Run type
4
single-ended
Read length (nt)
2
36
2
100
1
101
Library insert size (nt)
2
225-275
Library made from
3
RNA
2
DNA
Date released
4
February, 2018
1
May, 2021
Lab
5
AMP-T2D consortium
Replication type
4
unreplicated
1
anisogenic
lab.title!
Klaus Kaestner, Upenn
lab.title!!
Klaus Kaestner, Upenn
Showing 5 of 5 results
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Experiment
DSR213JXG
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell embryo (0 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR787281
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR358715
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR403069
released
ChIP-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR086684
released
ChIP-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP