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Schema
Citing CMDGA
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Assay category
3
Transcription
1
3D chromatin structure
Assay
3
single cell RNA-seq
1
Hi-C
Project
3
AMP
1
HPAP
RFA
3
AMP
1
HPAP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Organ
4
epithelium
4
pancreas
Life stage
3
adult
1
child
1
newborn
Available data
3
bam
3
bigWig
3
tsv
2
fastq
1
bedpe bed3+
1
cool
1
hic
Platform
2
Illumina NextSeq 500
Run type
single-ended
2
paired-ended
Read length (nt)
2
75
Library insert size (nt)
2
>100
Library made from
3
RNA
1
DNA
Date released
2
April, 2018
1
August, 2018
1
October, 2022
Lab
3
AMP-T2D consortium
1
Klaus Kaestner, Upenn
Replication type
15
unreplicated
4
anisogenic
Audit category:
1
audit script error
lab.title!
Kyle Gaulton, UCSD
files.run_type!
single-ended
Showing 4 of 4 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR808284
released
single cell RNA-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell male child (5 years) and male newborn (1 month)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR838788
released
single cell RNA-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (38 years) and female adult (44 years) and male adult (21 year) and male adult (22 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR718350
released
single cell RNA-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (37 years) and male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP