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Assay category
5
DNA binding
Assay
5
ChIP-seq
3
ATAC-seq
2
single cell RNA-seq
2
total RNA-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
5
histone
5
histone modification
3
narrow histone mark
2
broad histone mark
Biosample type
5
primary cell
Organ
5
epithelium
5
pancreas
Life stage
8
adult
5
child
Available data
5
bam
5
bed narrowPeak
5
bigWig
5
fastq
Platform
5
Illumina HiSeq 2000
Run type
5
single-ended
Read length (nt)
5
51
Library made from
5
DNA
Date released
5
September, 2018
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
Audit category:
5
missing controlled_by
lab.title!
Kyle Gaulton, UCSD
Showing 5 of 5 results
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Experiment
TSTSR192IUX
released
Audit not_compliant
1
ChIP-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell male child (5 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR278FQZ
released
Audit not_compliant
1
ChIP-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell female child (18 months)
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR319BES
released
Audit not_compliant
1
ChIP-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell female child (18 months)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR390YNG
released
Audit not_compliant
1
ChIP-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell female child (18 months)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR890RGG
released
Audit not_compliant
1
ChIP-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell female child (18 months)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP