Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA binding
Assay
4
ChIP-seq
1
pCHi-C
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Target of assay
4
histone
4
histone modification
4
narrow histone mark
Biosample type
4
primary cell
1
in vitro differentiated cells
Organ
4
epithelium
4
pancreas
1
adipose tissue
1
connective tissue
Life stage
5
unknown
Available data
5
fastq
4
bam
4
bed narrowPeak
4
bigWig
1
bedpe bed3+
Platform
4
Illumina Genome Analyzer IIx
1
Illumina HiSeq 4000
Run type
4
single-ended
1
paired-ended
Read length (nt)
246
101
229
36
221
100
206
50
189
76
91
51
61
8
59
75
49
40
33
90
27
43
23
98
22
49
20
16
20
28
15
26
14
27
14
102
11
25
10
35
10
91
8
41
7
24
7
33
6
200
5
32
5
151
4
44
4
61
4
94
3
67
2
37
2
38
2
70
2
97
2
150
1
20
1
30
1
69
1
72
1
99
1
105
1
110
1
125
1
140
1
147
Library made from
5
DNA
Date released
4
August, 2017
1
August, 2018
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
Audit category:
4
inconsistent control read length
lab.title!
Maike Sander, UCSD
replicates.library.biosample.life_stage!
embryonic
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR247243
released
Audit warning
1
ChIP-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR978899
released
Audit warning
1
ChIP-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR422389
released
Audit warning
1
ChIP-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR888854
released
Audit warning
1
ChIP-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP