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Schema
Citing CMDGA
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Assay category
6
DNA binding
Assay
122
total RNA-seq
13
ATAC-seq
6
ChIP-seq
Project
5
AMP
1
T1D
RFA
5
AMP
1
T1D
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
4
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Biosample type
5
in vitro differentiated cells
1
cell line
Organ
3
epithelium
3
pancreas
Life stage
4
unknown
2
adult
Available data
6
bam
6
bed narrowPeak
6
bigWig
5
tagAlign
Library made from
6
DNA
Date released
280
November, 2017
176
October, 2019
151
August, 2017
96
May, 2019
77
December, 2017
64
April, 2019
63
November, 2018
45
October, 2018
32
September, 2018
30
December, 2018
23
June, 2019
21
January, 2019
19
May, 2020
16
August, 2021
16
February, 2018
11
November, 2019
6
May, 2021
6
October, 2017
5
February, 2021
3
March, 2020
2
September, 2017
Lab
84
Kyle Gaulton, UCSD
6
AMP-T2D consortium
Replication type
5
unreplicated
1
isogenic
Audit category:
4
inconsistent ontology term
Showing 6 of 6 results
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Experiment
DSR503IWT
released
ChIP-seq
of pancreatic PP cell
Homo sapiens
pancreatic PP cell
Target:
PDX1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR783HPP
released
ChIP-seq
of pancreatic PP cell
Homo sapiens
pancreatic PP cell
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR708PNY
released
Audit error
1
ChIP-seq
of cardiomyocytes
Homo sapiens
cardiomyocytes
Target:
NR2F2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR123YJD
released
Audit error
1
ChIP-seq
of cardiomyocytes
Homo sapiens
cardiomyocytes
Target:
TBX5
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR800JBR
released
Audit error
1
ChIP-seq
of cardiomyocytes
Homo sapiens
cardiomyocytes
Target:
HEY2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR634CIJ
released
Audit error
1
ChIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D