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Assay category
5
DNA accessibility
Assay
206
DNase-seq
114
ChIP-seq
84
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
5
ATAC-seq
1
MPRA
1
snATAC-seq
Project
5
AMP
RFA
4
AMP2
1
AMP
Experiment status
4
released
1
archived
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
3
in vitro differentiated cells
2
tissue
Organ
2
pancreas
Life stage
3
unknown
2
adult
Available data
278
bed narrowPeak
175
bam
136
bigWig
64
xls
61
fastq
39
zippedFastqFolder
27
bigBed narrowPeak
14
tsv
12
bed bed3
7
bed bedgraph
4
bed bed3+
3
txt
2
bed broadPeak
Platform
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
2
paired-ended
Read length (nt)
1
50
1
125
Library made from
5
DNA
Date released
3
February, 2023
1
March, 2019
1
October, 2017
Lab
3
Struan F.A. Grant, CHOP
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Replication type
3
isogenic
2
anisogenic
Audit category:
1
inconsistent ontology term
month_released!
April, 2020
Showing 5 of 5 results
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Experiment
DSR820FCL
released
Audit error
1
ATAC-seq
of neuron cell of Hypothalamus (neuron)
Homo sapiens
neuron cell of Hypothalamus (neuron)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR166IXM
released
ATAC-seq
of Progenitor cell of Hypothalamus (neural progenitor cell)
Homo sapiens
Progenitor cell of Hypothalamus (neural progenitor cell)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR470JFP
released
ATAC-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
TSTSR955785
archived
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (52 years) and female adult (57 years) and male adult (53 years) and male adult (54 years) and male adult (59 years)
Lab:
Mark McCarthy, Oxford
Project:
AMP
Experiment
TSTSR140792
released
ATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (41 year) and male adult (59 years)
Lab:
Stephen Parker, UMich
Project:
AMP