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Assay category
2
DNA accessibility
Assay
331
ATAC-seq
261
single cell RNA-seq
236
total RNA-seq
140
ChIP-seq
87
RNA microarray
84
snATAC-seq
51
pCHi-C
50
WGBS
30
Hi-C
15
RRBS
10
MeRIP-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
GRO-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Organism
2
Homo sapiens
Biosample type
2
primary cell
Organ
2
epithelium
2
kidney
Life stage
2
adult
Available data
bam
205
bed narrowPeak
205
bigBed narrowPeak
205
bigWig
204
bed bed3+
204
bed broadPeak
204
bigBed broadPeak
9
fastq
Library made from
2
DNA
Date released
2
October, 2019
August, 2017
Lab
2
AMP-T2D consortium
Replication type
2
anisogenic
month_released!
August, 2017
biosample_type!
in vitro differentiated cells
files.file_type!
bam
Showing 2 of 2 results
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Experiment
DSR920RBU
released
DNase-seq
of kidney glomerular epithelial cell
Homo sapiens
kidney glomerular epithelial cell male adult (46 years) and male adult (62 years) and male adult (63 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR290FAD
released
DNase-seq
of kidney tubule cell
Homo sapiens
kidney tubule cell female adult (80 years) and male adult (62 years) and male adult (63 years)
Lab:
AMP-T2D consortium
Project:
AMP