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Assay category
7
DNA accessibility
Assay
298
total RNA-seq
71
ChIP-seq
68
ATAC-seq
6
snATAC-seq
4
MeRIP-seq
4
pCHi-C
3
Hi-C
1
DNase-seq
1
FAIRE-seq
1
RRBS
Project
6
T1D
1
AMP
RFA
6
T1D
1
AMP
Experiment status
7
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Organ
7
pancreas
Life stage
6
adult
1
unknown
Available data
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
fastq
Platform
1
Illumina Genome Analyzer
Run type
1
single-ended
Read length (nt)
1
20
Library made from
7
DNA
Date released
4
January, 2021
2
February, 2023
1
August, 2017
August, 2022
Lab
6
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Replication type
3
anisogenic
3
unreplicated
1
isogenic
month_released!
August, 2022
Showing 7 of 7 results
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Experiment
DSR897PVF
released
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (59 years) and male adult (26 years) and male adult (61 year)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR162EWO
released
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (59 years) and male adult (26 years) and male adult (27 years) and male adult (61 year)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR031KHQ
released
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (37 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR049FNX
released
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (62 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR707UPV
released
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (45 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR442HUB
released
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (32 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP