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Citing CMDGA
Clear Filters
Assay category
2
DNA methylation
Assay
566
ChIP-seq
270
ATAC-seq
260
single cell RNA-seq
248
total RNA-seq
85
RNA microarray
83
snATAC-seq
75
WGBS
53
pCHi-C
26
DNase-seq
10
MeRIP-seq
7
Hi-C
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
T1D
2
AMP
RFA
3
T1D
2
AMP
Experiment status
5
released
Genome assembly (visualization)
hg19
Organism
5
Homo sapiens
Biosample type
3
cell line
2
tissue
Organ
2
musculature of body
Life stage
3
unknown
2
adult
Library made from
5
DNA
Date released
3
February, 2023
2
August, 2017
Lab
3
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Replication type
3
isogenic
2
unreplicated
month_released!
December, 2019
assembly!
hg19
Showing 5 of 5 results
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Experiment
DSR991KIL
released
CRISPR genome editing followed by DNA sequencing
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR618IYM
released
CRISPR genome editing followed by DNA sequencing
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR351ZKB
released
CRISPR genome editing followed by DNA sequencing
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
TSTSR698044
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (72 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR637767
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP