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Assay category
5
DNA accessibility
Assay
13
ChIP-seq
5
ATAC-seq
2
WGBS
1
total RNA-seq
Project
4
AMP
1
HPAP
RFA
4
AMP
1
HPAP
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
5
epithelium
5
pancreas
Life stage
adult
3
child
2
unknown
Available data
4
bam
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
4
fastq
1
zippedFastqFolder
Platform
2
Illumina HiSeq 2000
2
Illumina NextSeq 500
1
HiSeq HighOutput V4
Run type
5
paired-ended
Read length (nt)
3
50
2
41
2
102
Library made from
5
DNA
Date released
2
September, 2017
2
September, 2018
1
May, 2022
Lab
4
AMP-T2D consortium
1
Klaus Kaestner, Upenn
Replication type
5
unreplicated
month_released!
February, 2021
files.file_type!
tsv
replicates.library.biosample.life_stage!
adult
Showing 5 of 5 results
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Experiment
DSR149NRO
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male child (8 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR986VZN
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female child (8 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR315AOE
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell male child (17 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR331274
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR928383
released
ATAC-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell
Lab:
AMP-T2D consortium
Project:
AMP