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Assay category
6
DNA binding
Assay
6
ChIP-seq
2
total RNA-seq
1
DNase-seq
1
pCHi-C
1
single cell RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
6
Homo sapiens
Target of assay
4
transcription factor
2
control
1
RNA binding protein
Biosample type
6
tissue
Organ
6
liver
Life stage
3
adult
3
child
3
unknown
Available data
6
bam
6
fastq
4
bed narrowPeak
4
bigWig
3
bed bed3+
2
bigBed narrowPeak
Platform
3
Illumina Genome Analyzer IIx
2
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
Run type
6
single-ended
Read length (nt)
4
36
2
32
Library made from
6
DNA
Date released
3
August, 2017
3
December, 2017
Lab
6
AMP-T2D consortium
Replication type
103
unreplicated
36
isogenic
6
anisogenic
month_released!
January, 2021
Showing 6 of 6 results
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Experiment
TSTSR981226
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
RAD21
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR296175
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR485515
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR629646
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR138850
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR212220
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP