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Assay category
1
3D chromatin structure
1
Transcription
Assay
1
Hi-C
1
single cell RNA-seq
Project
1
AMP
1
HPAP
RFA
1
AMP
1
HPAP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Organ
2
epithelium
2
pancreas
Life stage
2
adult
Available data
1
bam
1
bedpe bed3+
1
bigWig
1
cool
1
fastq
1
hic
1
tsv
Platform
1
Illumina NextSeq 500
Run type
1
paired-ended
Read length (nt)
1
75
1
100
Library insert size (nt)
1
>100
Library made from
1
DNA
1
RNA
Date released
July, 2018
1
April, 2018
1
October, 2022
Lab
1
AMP-T2D consortium
1
Klaus Kaestner, Upenn
Replication type
71
unreplicated
2
anisogenic
1
isogenic
Audit category:
1
audit script error
month_released!
July, 2018
files.read_length!
100
Showing 2 of 2 results
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Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR617554
released
single cell RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (38 years) and female adult (44 years) and male adult (21 year) and male adult (22 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP