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Schema
Citing CMDGA
Clear Filters
Assay category
6
DNA binding
Assay
199
total RNA-seq
42
WGBS
6
ChIP-seq
1
DNase-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
6
transcription factor
Biosample type
3
cell line
3
tissue
Organ
4
blood
bodily fluid
3
adipose tissue
3
connective tissue
3
liver
Life stage
3
child
3
unknown
Available data
6
bam
6
bigWig
6
fastq
3
bed narrowPeak
3
bigBed narrowPeak
Platform
5
Illumina HiSeq 2000
1
Illumina HiSeq 4000
Run type
3
paired-ended
3
single-ended
Read length (nt)
248
36
183
76
123
50
88
100
53
51
51
40
14
27
11
25
9
35
7
33
7
49
6
101
6
200
5
32
4
44
4
61
3
67
2
37
2
38
2
70
2
74
1
30
1
72
Library made from
6
DNA
Date released
3
August, 2017
2
November, 2017
1
November, 2018
Lab
6
AMP-T2D consortium
Replication type
3
isogenic
3
unreplicated
Audit category:
3
missing controlled_by
month_released!
July, 2019
organ_slims!
bodily fluid
Showing 6 of 6 results
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Experiment
TSTSR516CEC
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
ZNF24
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR142602
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
RFX1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR596598
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CREB1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR143230
released
Audit not_compliant
1
ChIP-seq
of white adipose tissue
Homo sapiens
white adipose tissue
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR844065
released
Audit not_compliant
1
ChIP-seq
of white adipose tissue
Homo sapiens
white adipose tissue
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR326998
released
Audit not_compliant
1
ChIP-seq
of white adipose tissue
Homo sapiens
white adipose tissue
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP