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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
241
ChIP-seq
37
single cell RNA-seq
6
WGBS
5
GRO-seq
3
DNase-seq
2
ATAC-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Organ
1
brain
1
liver
1
pancreas
Life stage
2
embryonic
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Platform
6
Illumina HiSeq 4000
4
Illumina HiSeq 2000
4
Illumina NextSeq 500
2
Illumina HiSeq 2500
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
Run type
2
paired-ended
1
single-ended
Read length (nt)
2
36
1
20
Library made from
3
DNA
Date released
2
November, 2018
1
August, 2017
Lab
3
AMP-T2D consortium
Replication type
2
anisogenic
1
unreplicated
month_released!
July, 2019
Showing 3 of 3 results
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Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR479BAW
released
DNase-seq
of brain
Homo sapiens
brain embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP