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Assay category
1
DNA methylation
Assay
962
ChIP-seq
386
total RNA-seq
167
DNase-seq
161
ATAC-seq
147
single cell RNA-seq
49
pCHi-C
21
snATAC-seq
9
Hi-C
9
WGBS
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
2
FAIRE-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
RRBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Life stage
adult
1
unknown
Available data
1
bed bedMethyl
1
bigBed bedMethyl
1
fastq
Platform
1
Illumina Genome Analyzer IIx
Run type
1
single-ended
Read length (nt)
1
36
Library made from
1
DNA
Date released
July, 2019
1
August, 2017
Lab
1
AMP-T2D consortium
Replication type
1
isogenic
month_released!
July, 2019
replicates.library.biosample.life_stage!
adult
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Experiment
TSTSR288454
released
RRBS
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP