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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
48
histone
48
histone modification
35
narrow histone mark
13
broad histone mark
13
control
4
transcription factor
1
RNA binding protein
Biosample type
4
tissue
Organ
4
pancreas
Life stage
4
unknown
Available data
4
bam
4
bed bed3+
4
bigWig
4
fastq
1
bed narrowPeak
Platform
3
Illumina HiSeq 2000
1
Illumina Genome Analyzer
Run type
4
single-ended
Read length (nt)
4
49
3
51
1
36
Library made from
4
DNA
Date released
4
August, 2017
Lab
4
AMP-T2D consortium
Replication type
3
anisogenic
1
unreplicated
Audit category:
3
missing controlled_by
month_released!
July, 2019
files.read_length!
51
Showing 4 of 4 results
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Experiment
TSTSR419074
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (60 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR570121
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (46 years) and male (64 years)
Target:
NKX6.1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR797006
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (58 years) and female (63 years)
Target:
NKX2.2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR213602
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans NONE and female (63 years)
Target:
MAFB
Lab:
AMP-T2D consortium
Project:
AMP