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Assay category
6
Transcription
Assay
1575
ChIP-seq
1300
total RNA-seq
415
ATAC-seq
172
single cell RNA-seq
87
RNA microarray
77
snATAC-seq
73
WGBS
58
DNase-seq
29
pCHi-C
24
Hi-C
21
RRBS
6
MeRIP-seq
6
small RNA-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
FAIRE-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snDrop-seq
1
whole genome sequencing assay
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Organ
2
adipose tissue
2
connective tissue
2
liver
2
pancreas
Life stage
6
adult
embryonic
Available data
6
bam
6
bigWig
6
tsv
Library made from
6
RNA
Date released
6
July, 2019
Lab
6
AMP-T2D consortium
Replication type
6
unreplicated
anisogenic
month_released!
June, 2018
replicates.library.biosample.life_stage!
embryonic
replication_type!
anisogenic
Showing 6 of 6 results
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Experiment
DSR322WAZ
released
small RNA-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR043CMH
released
small RNA-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR467AXQ
released
small RNA-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR882SMA
released
small RNA-seq
of omental fat pad
Homo sapiens
omental fat pad male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR562PEN
released
small RNA-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR089OIU
released
small RNA-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP