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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
474
total RNA-seq
141
ChIP-seq
25
ATAC-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
DNase-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
84
bone element
6
epithelium
5
kidney
4
blood vessel
4
connective tissue
4
limb
4
liver
4
pancreas
4
vasculature
2
adipose tissue
2
artery
2
brain
2
nerve
2
vein
1
spleen
Life stage
2
unknown
1
adult
Available data
3
bam
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
2
bed bed3+
2
fastq
Platform
1
Illumina HiSeq 2000
1
Illumina HiSeq 4000
1
Illumina NextSeq 500
Run type
2
paired-ended
Read length (nt)
2
36
Library made from
3
DNA
Date released
June, 2019
1
August, 2017
1
August, 2021
1
November, 2018
1
November, 2020
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
isogenic
month_released!
June, 2019
Showing 4 of 4 results
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Experiment
DSR795DZU
released
RNA microarray
of subcutaneous adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR457QKP
released
DNase-seq
of osteoblast
Homo sapiens
osteoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR521KIV
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999372
released
DNase-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP