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Citing CMDGA
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Assay category
3
DNA binding
1
DNA methylation
Assay
3
ChIP-seq
1
RRBS
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
4
Homo sapiens
Target of assay
2
transcription factor
1
RNA binding protein
1
control
Biosample type
4
tissue
Organ
4
liver
Life stage
4
adult
3
child
Available data
4
fastq
3
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Platform
51
Illumina HiSeq 2000
7
MiSeq
4
Illumina Genome Analyzer IIx
3
Illumina HiSeq 2500
2
Applied Biosystems SOLiD System 3 Plus
2
Illumina Genome Analyzer
2
Illumina Genome Analyzer II
1
Illumina HiSeq 4000
Run type
4
single-ended
Read length (nt)
4
36
Library made from
4
DNA
Date released
3
December, 2017
1
August, 2017
Lab
4
AMP-T2D consortium
Replication type
3
anisogenic
1
isogenic
month_released!
May, 2021
assay_slims!
DNA sequencing
Showing 4 of 4 results
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Experiment
TSTSR981226
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
RAD21
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR296175
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR485515
released
ChIP-seq
of liver
Homo sapiens
liver female child (6 years) and male adult (32 years)
Target:
rabbit-IgG-control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR335337
released
RRBS
of liver
Homo sapiens
liver female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP