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Assay
1279
total RNA-seq
1241
ChIP-seq
261
ATAC-seq
177
DNase-seq
106
single cell RNA-seq
26
Hi-C
19
RRBS
18
small RNA-seq
4
FAIRE-seq
4
pCHi-C
2
Capture-C
1
snATAC-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
1
primary cell
Organ
1
connective tissue
1
liver
Life stage
4
adult
Available data
2
bed bed3+
2
bedpe bed3+
2
ibed
1
bam
Library made from
4
DNA
Date released
2
February, 2021
2
March, 2020
Lab
4
AMP-T2D consortium
Replication type
3
isogenic
1
anisogenic
Audit category:
2
inconsistent ontology term
month_released!
November, 2018
audit.WARNING.category!
inconsistent assembly
Showing 4 of 4 results
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Experiment
DSR583PNT
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR535XNG
released
Audit error
1
pCHi-C
of lymphocyte of B lineage (iPSC)
Homo sapiens
lymphocyte of B lineage (iPSC)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR382TEU
released
Audit error
1
pCHi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP