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Schema
Citing CMDGA
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Assay category
4
DNA accessibility
Assay
3
ATAC-seq
1
MPRA
1
snATAC-seq
Project
5
AMP
RFA
3
AMP2
2
AMP
Experiment status
5
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
in vitro differentiated cells
1
cell line
1
tissue
Organ
1
musculature of body
Life stage
4
unknown
Available data
2011
bam
1792
bigWig
1771
bed narrowPeak
1028
bigBed narrowPeak
946
fastq
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
271
bed bed3+
122
tsv
101
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
5
hdf5
5
txt
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Library made from
RNA
4
DNA
Date released
3
February, 2023
1
May, 2022
1
October, 2022
Lab
3
Struan F.A. Grant, CHOP
2
AMP-T2D consortium
Replication type
3
isogenic
1
anisogenic
1
unreplicated
Audit category:
1
audit script error
1
inconsistent ontology term
month_released!
September, 2018
replicates.library.nucleic_acid_term_name!
RNA
Showing 5 of 5 results
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Experiment
DSR820FCL
released
Audit error
1
ATAC-seq
of neuron cell of Hypothalamus (neuron)
Homo sapiens
neuron cell of Hypothalamus (neuron)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR166IXM
released
ATAC-seq
of Progenitor cell of Hypothalamus (neural progenitor cell)
Homo sapiens
Progenitor cell of Hypothalamus (neural progenitor cell)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR470JFP
released
ATAC-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR700KTH
released
MPRA
of MIN6
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR127IDO
released
Audit error
1
snATAC-seq
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP