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Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA binding
2
DNA accessibility
Assay
3
ChIP-seq
2
snATAC-seq
Project
3
AMP
2
HPAP
RFA
3
AMP
2
HPAP
Experiment status
5
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
5
Homo sapiens
Target of assay
2
control
1
transcription factor
Biosample type
3
in vitro differentiated cells
2
primary cell
Organ
3
connective tissue
Life stage
3
unknown
2
adult
Available data
5
fastq
3
bam
1
bed bed3+
1
bed narrowPeak
1
bigWig
Platform
3
HiSeq 1500
2
HiSeq HighOutput V4
Run type
3
single-ended
2
paired-ended
2
unknown
Read length (nt)
264
36
252
101
217
100
205
50
200
76
91
51
51
40
50
75
39
8
33
90
27
43
22
49
20
16
14
27
14
102
12
28
11
25
10
35
9
91
8
41
7
24
7
33
6
200
5
32
5
151
4
44
4
61
4
94
3
67
2
37
2
38
2
70
2
74
2
97
2
150
1
20
1
30
1
69
1
72
1
99
1
105
1
110
1
125
1
140
1
147
Library made from
5
DNA
Date released
3
August, 2017
2
February, 2021
Lab
3
AMP-T2D consortium
2
Klaus Kaestner, Upenn
Replication type
4
unreplicated
1
anisogenic
Audit category:
2
audit script error
Audit category:
1
inconsistent control read length
month_released!
September, 2020
Showing 5 of 5 results
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Experiment
DSR177QLO
released
Audit error
1
snATAC-seq
of Langerhans cell
Homo sapiens
Langerhans cell female adult (23 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR591FUR
released
Audit error
1
snATAC-seq
of Langerhans cell
Homo sapiens
Langerhans cell male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR659518
released
Audit warning
1
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
RELA
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR400884
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR015740
released
ChIP-seq
of adipocyte
Homo sapiens
adipocyte
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP