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Schema
Citing CMDGA
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Assay category
4
DNA accessibility
Assay
229
ChIP-seq
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
in vitro differentiated cells
Organ
1
liver
1
pancreas
Life stage
3
unknown
1
adult
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
2
fastq
1
bed broadPeak
1
bigBed broadPeak
Platform
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
2
single-ended
1
paired-ended
Read length (nt)
1
20
1
36
1
101
Library made from
4
DNA
Date released
187
June, 2019
10
October, 2019
9
November, 2018
4
August, 2017
1
November, 2020
Lab
4
AMP-T2D consortium
Replication type
2
isogenic
1
anisogenic
1
unreplicated
biosample_type!
in vitro differentiated cells
Showing 4 of 4 results
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Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR986440
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP