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Citing CMDGA
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Assay category
5
DNA binding
Assay
508
total RNA-seq
84
RNA microarray
34
pCHi-C
27
snATAC-seq
18
ATAC-seq
18
single cell RNA-seq
10
Hi-C
6
WGBS
5
ChIP-seq
3
snDrop-seq
Project
3
T1D
2
AMP
RFA
3
T1D
2
AMP
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
control
1
transcription factor
Biosample type
3
cell line
2
tissue
Organ
artery
6
blood vessel
6
heart
6
vasculature
3
pancreas
1
epithelium
Life stage
3
unknown
2
adult
Available data
5
bam
4
bed narrowPeak
4
bigWig
2
tagAlign
Library made from
5
DNA
Date released
406
November, 2017
296
August, 2017
219
October, 2019
165
May, 2021
115
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
6
September, 2017
3
March, 2020
2
February, 2021
Lab
5
AMP-T2D consortium
Replication type
2
anisogenic
2
unreplicated
1
isogenic
Audit category:
1
inconsistent ontology term
organ_slims!
artery
Showing 5 of 5 results
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Experiment
DSR255YYU
released
ChIP-seq
of iPSC derived cell line
Homo sapiens
iPSC derived cell line
Target:
HNF4A
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR227UYB
released
ChIP-seq
of iPSC derived cell line
Homo sapiens
iPSC derived cell line
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR269GKW
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (53 years) and female adult (62 years) and male adult (34 years) and male adult (52 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D
Experiment
DSR886XRY
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (53 years) and female adult (62 years) and male adult (34 years) and male adult (52 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D
Experiment
DSR780WPW
released
Audit error
1
ChIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D