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Citing CMDGA
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Assay category
3
3D chromatin structure
Assay
20
total RNA-seq
3
Hi-C
2
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Project
2
AMP
1
ITG
RFA
2
AMP
1
ITG
Experiment status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
1
cell line
1
primary cell
1
tissue
Organ
2
pancreas
1
epithelium
Life stage
2
adult
1
embryonic
Available data
3
hic
2
bedpe bed3+
Library made from
3
DNA
Date released
10
March, 2020
8
July, 2019
5
October, 2019
3
August, 2021
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Lab
2
AMP-T2D consortium
1
ITG
Replication type
2
unreplicated
1
anisogenic
Audit category:
1
inconsistent ontology term
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Experiment
DSR798SDK
released
Hi-C
of chondrocytes
Homo sapiens
chondrocytes female adult (58 years) and female adult (63 years) and female adult (65 years) and female adult (73 years) and female adult (75 years) and male adult (61 year) and male adult (72 years) and male adult (75 years)
Lab:
ITG
Project:
ITG
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR951IJE
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP