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Schema
Citing CMDGA
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Assay category
5
DNA accessibility
2
DNA methylation
Assay
4
snATAC-seq
2
WGBS
1
FAIRE-seq
Project
4
T1D
3
AMP
RFA
4
T1D
3
AMP
Experiment status
7
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Organ
7
pancreas
Life stage
5
adult
2
child
Available data
3
bam
3
bigWig
3
fastq
2
bed bedMethyl
2
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
Platform
2
Illumina HiSeq 2500
1
Illumina Genome Analyzer I
Run type
3
single-ended
Read length (nt)
1
50
1
100
1
101
Library made from
7
DNA
Date released
14
August, 2017
4
January, 2021
3
March, 2020
3
November, 2018
2
June, 2019
2
October, 2018
1
July, 2019
1
May, 2021
Lab
4
Kyle Gaulton, UCSD
3
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
1
anisogenic
Showing 7 of 7 results
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Experiment
DSR346BYL
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male child (9 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR438WOP
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male adult (33 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR154TPS
released
snATAC-seq
of pancreas
Homo sapiens
pancreas female adult (33 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR498EST
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male child (14 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
TSTSR515GJS
released
WGBS
of pancreas
Homo sapiens
pancreas male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR575YHF
released
WGBS
of pancreas
Homo sapiens
pancreas female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP