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Citing CMDGA
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Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
30
histone
30
histone modification
19
broad histone mark
19
control
11
narrow histone mark
5
RNA binding protein
5
transcription factor
Biosample type
5
tissue
Organ
3
pancreas
2
adipose tissue
2
connective tissue
Life stage
5
adult
Available data
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
5
fastq
Platform
Illumina HiSeq 4000
3
Illumina HiSeq 2000
1
Illumina Genome Analyzer
1
Illumina HiSeq 2500
Run type
3
paired-ended
2
single-ended
Read length (nt)
3
100
1
51
1
76
Mapped read length (nt)
1
51
Library made from
5
DNA
Date released
35
November, 2017
20
November, 2018
8
August, 2017
6
January, 2019
5
May, 2019
5
May, 2021
5
May, 2024
5
October, 2018
4
April, 2019
4
June, 2019
3
December, 2017
1
August, 2021
1
November, 2019
Lab
5
AMP-T2D consortium
Replication type
4
unreplicated
1
anisogenic
files.platform.term_name!
Illumina HiSeq 4000
Showing 5 of 5 results
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Experiment
TSTSR691RHY
released
ChIP-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (51 year)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR665HXL
released
ChIP-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR159YIR
released
ChIP-seq
of body of pancreas
Homo sapiens
body of pancreas male adult (54 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR762JXU
released
ChIP-seq
of body of pancreas
Homo sapiens
body of pancreas male adult (37 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR141NSK
released
ChIP-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP