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Citing CMDGA
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Assay category
5
3D chromatin structure
Assay
26
ATAC-seq
20
total RNA-seq
13
ChIP-seq
5
Hi-C
1
MPRA
Project
3
HPAP
2
AMP
RFA
3
HPAP
2
AMP
Experiment status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
1
cell line
1
tissue
Organ
5
pancreas
4
epithelium
Life stage
4
adult
1
embryonic
Available data
5
bedpe bed3+
5
hic
3
cool
Library made from
5
DNA
Date released
10
March, 2020
8
July, 2019
5
October, 2019
3
August, 2021
3
October, 2022
2
November, 2019
1
December, 2018
1
March, 2019
1
March, 2023
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Replication type
3
anisogenic
2
unreplicated
Audit category:
3
audit script error
1
inconsistent ontology term
Showing 5 of 5 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR951IJE
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP