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Citing CMDGA
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Assay category
5
DNA accessibility
Assay
68
ChIP-seq
23
single cell RNA-seq
22
total RNA-seq
21
ATAC-seq
5
DNase-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Organ
2
liver
2
pancreas
adipose tissue
1
connective tissue
1
spleen
Life stage
4
adult
1
embryonic
Available data
5
bam
5
bed bed3+
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
5
bigWig
5
fastq
Platform
5
Illumina HiSeq 4000
4
Illumina HiSeq 2000
3
Illumina NextSeq 500
2
Illumina HiSeq 2500
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
Run type
5
paired-ended
Read length (nt)
5
36
Library made from
5
DNA
Date released
5
November, 2018
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
organ_slims!
adipose tissue
Showing 5 of 5 results
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Experiment
TSTSR436ZZC
released
DNase-seq
of spleen
Homo sapiens
spleen male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR678CGC
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR501DXR
released
DNase-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR195PGP
released
DNase-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP