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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
2
WGBS
1
FAIRE-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
3
Homo sapiens
Target of assay
12
histone
histone modification
8
broad histone mark
4
narrow histone mark
3
control
1
RNA binding protein
1
transcription factor
Biosample type
4
tissue
Organ
4
pancreas
Life stage
3
adult
Available data
4
bam
4
fastq
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
1
tagAlign
Platform
2
Illumina Genome Analyzer
2
Illumina HiSeq 2000
Run type
4
single-ended
Read length (nt)
2
36
2
51
Mapped read length (nt)
2
51
Library made from
3
DNA
Date released
2
August, 2017
2
October, 2018
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
anisogenic
organ_slims!
adipose tissue
target.investigated_as!
histone modification
Showing 4 of 4 results
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Experiment
TSTSR141NSK
released
ChIP-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR824SDJ
released
ChIP-seq
of pancreas
Homo sapiens
pancreas adult (60 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR203642
released
ChIP-seq
of pancreas
Homo sapiens
pancreas female adult (30 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR850449
released
ChIP-seq
of pancreas
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP