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Citing CMDGA
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Assay category
1
DNA accessibility
1
DNA binding
Assay
1
ChIP-seq
1
DNase-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Biosample type
2
primary cell
Life stage
2
unknown
Available data
18
bam
18
bigWig
17
fastq
16
bed narrowPeak
16
bigBed narrowPeak
14
bed broadPeak
bigBed broadPeak
12
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Platform
1
Illumina HiSeq 2000
Run type
1
paired-ended
1
single-ended
Read length (nt)
1
36
1
76
Library made from
2
DNA
Date released
2
August, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
Audit category:
1
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
organ_slims!
adrenal gland
files.file_type!
bigBed broadPeak
Showing 2 of 2 results
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Experiment
TSTSR986440
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR410352
released
Audit warning
3
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP