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Citing CMDGA
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Assay category
2
3D chromatin structure
Assay
1225
total RNA-seq
1193
ChIP-seq
198
DNase-seq
187
ATAC-seq
100
single cell RNA-seq
18
small RNA-seq
16
WGBS
2
Hi-C
Project
1
AMP
1
ITG
RFA
1
AMP
1
ITG
Experiment status
2
released
Genome assembly (visualization)
22
hg19
2
GRCh38
Organism
2
Homo sapiens
Biosample type
1
cell line
1
primary cell
Organ
1
pancreas
Life stage
2
adult
Available data
1
bed bed3+
1
bigWig
1
hdf5
1
hic
Library made from
2
DNA
Date released
1
March, 2023
1
October, 2019
Lab
1
AMP-T2D consortium
1
ITG
Replication type
1
anisogenic
1
isogenic
Audit category:
1
inconsistent assembly
organ_slims!
blood vessel
lab.title!
Mark McCarthy, Oxford
Showing 2 of 2 results
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Experiment
DSR798SDK
released
Hi-C
of chondrocytes
Homo sapiens
chondrocytes female adult (58 years) and female adult (63 years) and female adult (65 years) and female adult (73 years) and female adult (75 years) and male adult (61 year) and male adult (72 years) and male adult (75 years)
Lab:
ITG
Project:
ITG
Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP