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Citing CMDGA
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Assay
842
ChIP-seq
245
total RNA-seq
175
DNase-seq
128
single cell RNA-seq
64
ATAC-seq
28
snATAC-seq
17
WGBS
5
GRO-seq
4
RRBS
3
Hi-C
3
pCHi-C
2
Capture-C
2
FAIRE-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
1
cell line
1
in vitro differentiated cells
1
primary cell
Organ
2
connective tissue
1
adipose tissue
1
liver
Life stage
2
adult
1
unknown
Available data
29
tsv
3
bedpe bed3+
2
bed bed3+
2
ibed
1
bam
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
3
DNA
Date released
2
February, 2021
1
August, 2018
Lab
3
AMP-T2D consortium
Replication type
1
anisogenic
1
isogenic
1
unreplicated
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Experiment
DSR583PNT
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP