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Citing CMDGA
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Assay category
5
3D chromatin structure
Assay
5
Hi-C
Project
3
HPAP
2
AMP
RFA
3
HPAP
2
AMP
Experiment status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Organ
5
epithelium
4
pancreas
brain
2
blood vessel
2
vasculature
1
connective tissue
1
liver
Life stage
4
adult
1
unknown
Available data
3144
bam
2942
bigWig
1609
bed narrowPeak
1574
tsv
1332
fastq
910
bigBed narrowPeak
280
tagAlign
274
bed broadPeak
246
bigBed broadPeak
238
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
11
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Library made from
5
DNA
Date released
3
October, 2022
1
July, 2019
1
October, 2019
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Replication type
3
anisogenic
2
isogenic
Audit category:
3
audit script error
Audit category:
1
inconsistent assembly
organ_slims!
brain
target.investigated_as!
other post-translational modification
Showing 5 of 5 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP