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Citing CMDGA
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Assay category
7
3D chromatin structure
Assay
7
Hi-C
Project
4
AMP
3
HPAP
RFA
4
AMP
3
HPAP
Experiment status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
cell line
Organ
5
epithelium
4
pancreas
3
brain
2
blood vessel
2
vasculature
connective tissue
1
liver
Life stage
4
adult
3
unknown
Available data
2799
bam
2599
bigWig
1742
bed narrowPeak
1257
fastq
1122
tsv
1014
bigBed narrowPeak
376
tagAlign
312
bed broadPeak
276
bigBed broadPeak
246
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Library made from
7
DNA
Date released
3
July, 2019
3
October, 2022
1
October, 2019
Lab
4
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Replication type
4
isogenic
3
anisogenic
Audit category:
3
audit script error
Audit category:
1
inconsistent assembly
organ_slims!
connective tissue
Showing 7 of 7 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP