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Assay category
1
DNA accessibility
Assay
468
ChIP-seq
320
ATAC-seq
200
total RNA-seq
199
single cell RNA-seq
85
RNA microarray
78
snATAC-seq
58
WGBS
55
pCHi-C
28
Hi-C
17
RRBS
10
MeRIP-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
DNase-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Organism
1
Homo sapiens
Biosample type
1
tissue
Organ
2
epithelium
kidney
1
liver
Life stage
1
adult
Available data
130
bam
130
bed narrowPeak
130
bigBed narrowPeak
bigWig
128
bed broadPeak
128
bigBed broadPeak
126
bed bed3+
12
fastq
Library made from
1
DNA
Date released
1
August, 2017
Lab
1
AMP-T2D consortium
Replication type
1
unreplicated
organ_slims!
kidney
files.file_type!
bigWig
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Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP