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Schema
Citing CMDGA
Clear Filters
Assay category
2
3D chromatin structure
Assay
106
ChIP-seq
99
total RNA-seq
28
ATAC-seq
6
MeRIP-seq
4
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
Capture-C
2
DNase-seq
2
Hi-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
15
tissue
9
primary cell
4
in vitro differentiated cells
2
cell line
Organ
liver
2
pancreas
1
epithelium
Life stage
1
adult
1
embryonic
Available data
1
bed bed3+
1
bedpe bed3+
1
bigWig
1
hdf5
1
hic
Library made from
2
DNA
Date released
1
November, 2019
1
October, 2019
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
liver
Showing 2 of 2 results
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Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP