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Schema
Citing CMDGA
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Assay category
2
DNA accessibility
2
DNA methylation
Assay
857
ChIP-seq
237
total RNA-seq
134
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
2
FAIRE-seq
2
RRBS
1
Hi-C
1
pCHi-C
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Organ
musculature of body
2
pancreas
1
liver
Life stage
2
adult
2
unknown
Available data
16
bed bedMethyl
16
bigBed bedMethyl
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
4
fastq
1
tar
Platform
2
Illumina Genome Analyzer I
2
Illumina Genome Analyzer IIx
Run type
4
single-ended
Read length (nt)
2
36
1
35
1
50
Library made from
4
DNA
Date released
3
August, 2017
1
November, 2018
Lab
4
AMP-T2D consortium
Replication type
2
isogenic
1
anisogenic
1
unreplicated
organ_slims!
musculature of body
Showing 4 of 4 results
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Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR335337
released
RRBS
of liver
Homo sapiens
liver female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR288454
released
RRBS
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP