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Citing CMDGA
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Assay category
3
DNA binding
1
3D chromatin structure
1
DNA accessibility
Assay
3
ChIP-seq
1
DNase-seq
1
Hi-C
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Biosample type
5
primary cell
Organ
5
brain
Life stage
5
unknown
Available data
5
bigWig
4
bam
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
fastq
2
bed bed3+
1
hdf5
Platform
3
Illumina Genome Analyzer
Run type
3
single-ended
Read length (nt)
3
36
Library made from
5
DNA
Date released
3
November, 2017
1
July, 2019
1
June, 2019
Lab
5
AMP-T2D consortium
Replication type
4
isogenic
1
unreplicated
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small intestine
urinary bladder
Showing 5 of 5 results
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Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR442RAJ
released
DNase-seq
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR219161
released
ChIP-seq
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR956521
released
ChIP-seq
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR805515
released
ChIP-seq
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP