Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
4
Transcription
1
DNA sequencing
Assay
381
ChIP-seq
299
total RNA-seq
128
ATAC-seq
48
pCHi-C
20
DNase-seq
11
RRBS
9
Hi-C
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
single cell RNA-seq
4
snATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
2
RNA microarray
1
FAIRE-seq
1
snDrop-seq
1
whole genome sequencing assay
Project
5
AMP
RFA
4
AMP
1
AMP2
Experiment status
5
released
Organism
5
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
tissue
1
cell line
Organ
1
kidney
1
liver
1
musculature of body
Life stage
215
adult
106
embryonic
38
child
7
newborn
5
unknown
Available data
2
tsv
1
vcf
Library made from
4
RNA
1
DNA
Date released
3
December, 2019
1
August, 2021
1
May, 2022
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
2
isogenic
2
unreplicated
1
anisogenic
Audit category:
2
audit script error
2
inconsistent ontology term
organ_slims!
spleen
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
Experiment
DSR946SNV
released
single cell RNA-seq
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR246XUG
released
whole genome sequencing assay
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR606NGC
released
single cell RNA-seq
of kidney
Homo sapiens
kidney
Lab:
AMP-T2D consortium
Project:
AMP