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Citing CMDGA
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Assay category
5
DNA methylation
Assay
552
ChIP-seq
189
total RNA-seq
23
ATAC-seq
6
DNase-seq
5
WGBS
4
Hi-C
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
0
snATAC-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
tissue
1
cell line
Organ
62
pancreas
47
epithelium
10
lung
8
blood
8
bodily fluid
8
heart
6
adipose tissue
6
connective tissue
6
kidney
5
liver
2
blood vessel
2
musculature of body
2
spleen
2
vasculature
1
limb
Life stage
3
adult
2
child
Available data
2
fastq
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Platform
1
Illumina HiSeq 2500
1
Illumina HiSeq X Ten
Run type
1
paired-ended
1
single-ended
Read length (nt)
1
100
1
151
Library made from
5
DNA
Date released
3
August, 2017
1
July, 2019
1
November, 2018
Lab
5
AMP-T2D consortium
Replication type
3
unreplicated
2
isogenic
organ_slims!
stomach
Showing 5 of 5 results
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Experiment
DSR696NUE
released
WGBS
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR496DZA
released
WGBS
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621783
released
WGBS
of liver
Homo sapiens
liver male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR259530
released
WGBS
of liver
Homo sapiens
liver female adult (25 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR873184
released
WGBS
of liver
Homo sapiens
liver male adult (31 year)
Lab:
AMP-T2D consortium
Project:
AMP