Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
7
DNA accessibility
Assay
755
ChIP-seq
241
total RNA-seq
195
ATAC-seq
95
single cell RNA-seq
49
DNase-seq
48
pCHi-C
19
Hi-C
19
RRBS
11
small RNA-seq
10
MeRIP-seq
8
WGBS
7
snATAC-seq
4
FAIRE-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
snDrop-seq
1
DNAme array
Project
5
AMP
2
T1D
RFA
4
AMP2
2
T1D
1
AMP
Experiment status
7
released
Genome assembly (visualization)
1
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Organ
4
kidney
2
pancreas
1
musculature of body
Life stage
6
adult
1
unknown
Available data
1
bed bed3+
1
txt
Library made from
7
DNA
Date released
January, 2021
4
August, 2021
2
February, 2023
1
May, 2022
Lab
4
Katalin Susztak, Upenn
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Replication type
unreplicated
4
isogenic
3
anisogenic
Audit category:
1
audit script error
organ_slims!
stomach
month_released!
January, 2021
replication_type!
unreplicated
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
Experiment
DSR127IDO
released
Audit error
1
snATAC-seq
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR897PVF
released
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (59 years) and male adult (26 years) and male adult (61 year)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR162EWO
released
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (59 years) and male adult (26 years) and male adult (27 years) and male adult (61 year)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR573GUG
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (65 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR988IHH
released
snATAC-seq
of kidney
Homo sapiens
kidney male adult (74 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR992XSL
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (85 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR060OQF
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (85 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP