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Schema
Citing CMDGA
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Assay category
2
DNA accessibility
Assay
398
total RNA-seq
73
ChIP-seq
6
ATAC-seq
6
WGBS
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
in vitro differentiated cells
Organ
83
kidney
36
limb
34
brain
34
musculature of body
33
heart
19
epithelium
18
ureter
14
connective tissue
12
vasculature
10
blood vessel
9
liver
9
pancreas
8
eye
4
adipose tissue
4
artery
2
intestine
2
nerve
2
spleen
2
thymus
2
vein
1
adrenal gland
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
stomach
1
urinary bladder
Life stage
2
adult
2
unknown
Available data
2
bam
2
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
1
bedpe bed3+
1
tsv
Platform
2
Illumina HiSeq 4000
1
Illumina NextSeq 500
Run type
2
paired-ended
Read length (nt)
1
36
1
69
Library made from
4
DNA
Date released
1
August, 2018
1
June, 2019
1
March, 2020
1
November, 2018
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
anisogenic
Showing 4 of 4 results
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Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR256LQY
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR521KIV
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP