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Citing CMDGA
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Assay category
6
DNA methylation
Assay
604
ChIP-seq
249
total RNA-seq
98
ATAC-seq
87
DNase-seq
65
single cell RNA-seq
6
RRBS
6
snATAC-seq
5
Hi-C
5
WGBS
5
pCHi-C
4
STARR-seq
4
small RNA-seq
3
snDrop-seq
2
RNA microarray
1
FAIRE-seq
1
whole genome sequencing assay
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
4
primary cell
2
tissue
Organ
6
epithelium
5
musculature of body
4
kidney
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Life stage
4
unknown
2
adult
Available data
6
bed bedMethyl
6
bigBed bedMethyl
1
fastq
Platform
1
Illumina Genome Analyzer IIx
Run type
1
single-ended
Read length (nt)
1
36
Library made from
6
DNA
Date released
5
July, 2019
1
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
isogenic
Audit category:
1
inconsistent ontology term
Showing 6 of 6 results
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Experiment
DSR691GRN
released
RRBS
of renal cortical epithelial cell
Homo sapiens
renal cortical epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR567VXL
released
RRBS
of kidney epithelial cell
Homo sapiens
kidney epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR682FAB
released
Audit error
1
RRBS
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR841GWU
released
RRBS
of kidney
Homo sapiens
kidney female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR467ULV
released
RRBS
of hepatocyte
Homo sapiens
hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR335337
released
RRBS
of liver
Homo sapiens
liver female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP