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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
120
ChIP-seq
30
total RNA-seq
4
WGBS
3
Hi-C
3
pCHi-C
2
ATAC-seq
2
RRBS
2
STARR-seq
1
DNase-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
1
cell line
1
primary cell
Organ
111
pancreas
75
kidney
69
epithelium
43
artery
43
blood vessel
43
heart
43
vasculature
28
eye
16
connective tissue
12
bone element
12
skeleton
6
limb
2
adipose tissue
2
brain
2
liver
1
pituitary gland
1
skin of body
Life stage
1
adult
1
embryonic
Available data
23
bed narrowPeak
bigWig
3
bam
1
bed bed3
1
bigBed narrowPeak
1
fastq
Library made from
2
DNA
Date released
1
February, 2021
1
October, 2019
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
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bigWig
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Experiment
DSR057RCG
released
Audit error
1
ATAC-seq
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR093FMP
released
Audit error
1
ATAC-seq
of Liver fetal (hepatocyte)
Homo sapiens
Liver fetal (hepatocyte) female embryo (76 days)
Lab:
AMP-T2D consortium
Project:
AMP